https://globalinfectiousdisease.com/research/ Published infectious-disease literature filtered to Genomic study. en Wed, 09 Sep 2026 07:02:01 GMT https://globalinfectiousdisease.com/research/articles/10-3389-fmicb-2026-1912439-d3184f7c/ https://globalinfectiousdisease.com/research/articles/10-3389-fmicb-2026-1912439-d3184f7c/ Wed, 09 Sep 2026 00:00:00 GMT Mumps incidence in Shandong declined after vaccine introduction but remained above WHO elimination thresholds; the study provides whole-genome evidence that genotype F strains did not detectably diverge or drift away from the vaccine strain over ~12 years, while illustrating that SH-gene typing alone lacks resolution for closely related isolates. Mumps Rubella Measles Surveillance Vaccination Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-3201-eid3209-260289-07264e48/ https://globalinfectiousdisease.com/research/articles/10-3201-eid3209-260289-07264e48/ Tue, 01 Sep 2026 00:00:00 GMT The authors suggest that whole-genome sequencing may strengthen outbreak investigation and source attribution for L. monocytogenes and that produce-associated transmission may reflect distinct pathways. Listeriosis Genomic epidemiology Outbreak investigation Surveillance Transmission dynamics Genomic study https://globalinfectiousdisease.com/research/articles/10-1371-journal-pdig-0001473-f2024cba/ https://globalinfectiousdisease.com/research/articles/10-1371-journal-pdig-0001473-f2024cba/ Mon, 31 Aug 2026 00:00:00 GMT Centralizing genomic and clinical data streams allows continuous assessment of viral behavior and transmission networks across a large jurisdiction. The established pipeline offers a replicable template for health departments aiming to strengthen routine variant tracking and resource allocation. SARS COVID-19 Genomic epidemiology Surveillance Transmission dynamics Vaccination Genomic study https://globalinfectiousdisease.com/research/articles/10-1093-jtm-taag079-36a05c6e/ https://globalinfectiousdisease.com/research/articles/10-1093-jtm-taag079-36a05c6e/ Sat, 29 Aug 2026 00:00:00 GMT The report illustrates how coordinated monitoring networks can quickly characterize emerging arboviral activity in non-endemic areas, offering insights into optimal diagnostic windows and the importance of continuous pathogen tracking. Chikungunya Outbreak investigation Surveillance Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1002-evj-70314-8c1f8d64/ https://globalinfectiousdisease.com/research/articles/10-1002-evj-70314-8c1f8d64/ Wed, 26 Aug 2026 00:00:00 GMT The genetic proximity to foreign viral strains highlights cross-border animal trade as a potential introduction pathway, emphasizing the need for continuous genomic monitoring to track strain evolution and guide control measures. Influenza Genomic epidemiology Surveillance Outbreak investigation Transmission dynamics Genomic study https://globalinfectiousdisease.com/research/articles/10-1186-s41936-026-00636-9-6fc68508/ https://globalinfectiousdisease.com/research/articles/10-1186-s41936-026-00636-9-6fc68508/ Wed, 26 Aug 2026 00:00:00 GMT The findings indicate that molecular testing may complement morphological identification in mosquito vector monitoring in the reported Limpopo setting. The abstract states that using additional, more variable markers alongside morphology could improve species discrimination and support malaria-control programmes. Malaria Genomic epidemiology Surveillance Transmission dynamics Genomic study https://globalinfectiousdisease.com/research/articles/10-3389-fvets-2026-1911871-a563845d/ https://globalinfectiousdisease.com/research/articles/10-3389-fvets-2026-1911871-a563845d/ Wed, 26 Aug 2026 00:00:00 GMT Identifying the virus in a new territory emphasizes the necessity for sustained genomic monitoring to evaluate ecological spread, animal health implications, and potential cross-species dynamics. Influenza Surveillance Transmission dynamics Genomic epidemiology One Health Genomic study https://globalinfectiousdisease.com/research/articles/10-1007-s00438-026-02505-0-cb97d6cc/ https://globalinfectiousdisease.com/research/articles/10-1007-s00438-026-02505-0-cb97d6cc/ Tue, 25 Aug 2026 00:00:00 GMT The findings document the presence of epidemic VREfm ST80 clone evolving in Algerian healthcare settings, with vancomycin resistance severely limiting treatment options for a major global health threat. The rep17 plasmid carrying both vancomycin and aminoglycoside resistance genes raises concern for potential horizontal gene transfer to other pathogens. Vancomycin resistance Genomic epidemiology Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-medcli-2026-107565-28481b3b/ https://globalinfectiousdisease.com/research/articles/10-1016-j-medcli-2026-107565-28481b3b/ Tue, 25 Aug 2026 00:00:00 GMT Tularemia is classified as a CDC Category A bioterrorism agent due to extreme virulence (infection possible with as few as 10 cells) and 30% mortality in untreated cases. The documented re-emergence across multiple Northern Hemisphere regions underscores the need for updated clinical awareness and early diagnostic capacity. Tularemia Vaccination Genomic epidemiology Diagnostics Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-1128-spectrum-04205-25-f76c67c4/ https://globalinfectiousdisease.com/research/articles/10-1128-spectrum-04205-25-f76c67c4/ Tue, 25 Aug 2026 00:00:00 GMT The findings provide genomic and vector-associated information about West Nile virus detected in the sampled Kenyan settings, including two reported viral lineages and a reported vertical-transmission event. The authors identify continued genomic surveillance, vector competence research, and integrated arbovirus monitoring as relevant areas for prevention and control planning. West Nile virus Transmission dynamics Surveillance Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1371-journal-pntd-0014221-2e4f6b80/ https://globalinfectiousdisease.com/research/articles/10-1371-journal-pntd-0014221-2e4f6b80/ Fri, 21 Aug 2026 00:00:00 GMT The observation indicates that viral persistence across off-season periods may occur in warming subtropical zones, highlighting the necessity for continuous mosquito monitoring programs. Dengue Transmission dynamics Surveillance Outbreak investigation Genomic epidemiology Climate and environment Travel medicine Genomic study https://globalinfectiousdisease.com/research/articles/10-1371-journal-pntd-0014671-0a2f1ad1/ https://globalinfectiousdisease.com/research/articles/10-1371-journal-pntd-0014671-0a2f1ad1/ Thu, 20 Aug 2026 00:00:00 GMT The confirmed establishment of genetically diverse Ae. aegypti populations in southeastern Iran represents an emerging invasion corridor that elevates arbovirus transmission risk, including dengue, chikungunya, Zika, and yellow fever. The genetic connectivity with endemic regions in Latin America, Africa, and South Asia underscores the need for integrated vector monitoring and genomic surveillance to inform prevention strategies. Dengue Chikungunya Yellow fever Surveillance Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1099-mgen-0-001806-219022b5/ https://globalinfectiousdisease.com/research/articles/10-1099-mgen-0-001806-219022b5/ Tue, 18 Aug 2026 00:00:00 GMT Reducing reliance on lengthy culture procedures may accelerate pathogen genome recovery for epidemiological tracking. Tuberculosis Genomic epidemiology Diagnostics Genomic study https://globalinfectiousdisease.com/research/articles/10-1099-mgen-0-001813-f29b2d9a/ https://globalinfectiousdisease.com/research/articles/10-1099-mgen-0-001813-f29b2d9a/ Tue, 18 Aug 2026 00:00:00 GMT Results inform public health interventions by clarifying transmission dynamics and antimicrobial resistance patterns relevant to treatment strategies. The authors emphasize the necessity for enhanced national and cross-border genomic surveillance to manage control efforts effectively. Cholera Genomic epidemiology Surveillance Outbreak investigation Transmission dynamics Antimicrobial resistance Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-3389-fpubh-2026-1863867-69d9c743/ https://globalinfectiousdisease.com/research/articles/10-3389-fpubh-2026-1863867-69d9c743/ Tue, 18 Aug 2026 00:00:00 GMT Urban municipalities must incorporate food safety measures into their zoonotic monitoring strategies to address non-agricultural transmission routes. Brucellosis Surveillance Transmission dynamics Genomic epidemiology One Health Genomic study https://globalinfectiousdisease.com/research/articles/10-1093-cid-ciag489-7c47875c/ https://globalinfectiousdisease.com/research/articles/10-1093-cid-ciag489-7c47875c/ Thu, 13 Aug 2026 00:00:00 GMT The findings provide evidence that genomic sequencing can be used to refine classification of suspected household influenza transmission events. Within the supplied article, the results are relevant to evaluating household transmission and treatment effects, but they do not establish a broader population-level surveillance signal. Influenza Transmission dynamics Genomic epidemiology Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-1371-journal-pntd-0014565-b79ade7a/ https://globalinfectiousdisease.com/research/articles/10-1371-journal-pntd-0014565-b79ade7a/ Mon, 03 Aug 2026 00:00:00 GMT Antigenic variations identified in key viral proteins indicate possible challenges for existing diagnostic assays and immunization platforms, reinforcing the value of continuous genomic tracking for health planning. Japanese Encephalitis Rabies Genomic epidemiology Surveillance Outbreak investigation Vaccination Diagnostics Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-ijid-2026-109058-27663fab/ https://globalinfectiousdisease.com/research/articles/10-1016-j-ijid-2026-109058-27663fab/ Sat, 01 Aug 2026 00:00:00 GMT The widespread presence of resistant strains and genetic diversity suggests that local infection control strategies and laboratory testing protocols may require updates to address emerging transmission patterns. Diphtheria Tetanus COVID-19 Antimicrobial resistance Outbreak investigation Genomic epidemiology Surveillance Transmission dynamics Vaccination Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-ijid-2026-109061-bb0c513c/ https://globalinfectiousdisease.com/research/articles/10-1016-j-ijid-2026-109061-bb0c513c/ Sat, 01 Aug 2026 00:00:00 GMT The findings illustrate the need for integrated cross-regional genomic surveillance and improved diagnostic timeliness to address tuberculosis transmission in increasingly mobile and diverse populations. Tuberculosis Transmission dynamics Diagnostics Surveillance Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-s1473-3099-26-00227-6-2767a2bd/ https://globalinfectiousdisease.com/research/articles/10-1016-s1473-3099-26-00227-6-2767a2bd/ Wed, 01 Jul 2026 00:00:00 GMT The abstract frames sexually transmissible shigellosis as a public health concern requiring interventions beyond traditional enteric-disease measures. It also highlights antimicrobial stewardship as relevant across pathogens in a syndemic setting. Shigellosis Antimicrobial resistance Genomic epidemiology Surveillance Transmission dynamics Treatment Travel medicine Genomic study https://globalinfectiousdisease.com/research/articles/10-1186-s12879-026-13793-7-f951a548/ https://globalinfectiousdisease.com/research/articles/10-1186-s12879-026-13793-7-f951a548/ Thu, 11 Jun 2026 00:00:00 GMT Tracking these adapted viral lineages helps clarify regional transmission pathways and highlights potential shifts in pathogen behavior affecting community health planning. Chikungunya Dengue Outbreak investigation Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2026-31-23-2600443-05bbfb72/ https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2026-31-23-2600443-05bbfb72/ Thu, 11 Jun 2026 00:00:00 GMT The event demonstrates that sustained immunization programs can be circumvented by specific socioeconomic and environmental risk factors, necessitating targeted monitoring of cutaneous manifestations. Diphtheria Vaccination Outbreak investigation Genomic epidemiology Transmission dynamics Genomic study https://globalinfectiousdisease.com/research/articles/10-1186-s40249-026-01465-2-1e0e5551/ https://globalinfectiousdisease.com/research/articles/10-1186-s40249-026-01465-2-1e0e5551/ Thu, 04 Jun 2026 00:00:00 GMT Incorporating molecular tracking alongside travel history may strengthen early detection frameworks for emerging domestic clusters. Targeting monitoring resources at major transit corridors and high-incidence zones could support more proactive containment strategies. Chikungunya Outbreak investigation Transmission dynamics Genomic epidemiology Surveillance Travel medicine Genomic study https://globalinfectiousdisease.com/research/articles/10-1128-spectrum-03586-25-7d367107/ https://globalinfectiousdisease.com/research/articles/10-1128-spectrum-03586-25-7d367107/ Thu, 07 May 2026 00:00:00 GMT Documenting this rare tuberculosis complex variant in a captive species highlights the necessity for refined diagnostic protocols and precise antimicrobial testing. The authors propose that coordinated monitoring of affected wildlife facilities and associated personnel may help limit potential cross-species spread. Tuberculosis Genomic epidemiology Surveillance Transmission dynamics Antimicrobial resistance Diagnostics Treatment One Health Genomic study https://globalinfectiousdisease.com/research/articles/10-1038-s41541-026-01460-6-f7a16ea1/ https://globalinfectiousdisease.com/research/articles/10-1038-s41541-026-01460-6-f7a16ea1/ Tue, 21 Apr 2026 00:00:00 GMT The investigation addresses agricultural economic concerns and zoonotic transmission potential by evaluating livestock-targeted immunization strategies against expanding avian influenza lineages. Influenza H5N1 Vaccination Treatment Transmission dynamics Genomic epidemiology One Health Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-ijid-2026-108397-8cc21dd3/ https://globalinfectiousdisease.com/research/articles/10-1016-j-ijid-2026-108397-8cc21dd3/ Wed, 01 Apr 2026 00:00:00 GMT The convergence of resistance, hypervirulence, and potential vaccine escape within a dominant lineage is framed by the authors as grounds to revisit antibiotic stewardship and pertussis vaccination strategies. Pertussis Genomic epidemiology Antimicrobial resistance Surveillance Vaccination Genomic study https://globalinfectiousdisease.com/research/articles/10-1186-s12879-026-13029-8-78f0e184/ https://globalinfectiousdisease.com/research/articles/10-1186-s12879-026-13029-8-78f0e184/ Mon, 16 Mar 2026 00:00:00 GMT Persistent genomic surveillance remains essential for spotting novel strains and guiding immunization policy adjustments. The widespread presence of antibody-evasion mutations indicates potential pressures on existing preventive measures. SARS COVID-19 Influenza Vaccination Genomic epidemiology Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2026-31-4-2600049-980ed3a5/ https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2026-31-4-2600049-980ed3a5/ Thu, 29 Jan 2026 00:00:00 GMT The detections confirm local West Nile virus circulation in Belgium for the first time and have implications for animal and public health preparedness and surveillance planning for the 2026 mosquito season. West Nile virus Surveillance Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1186-s12879-026-12594-2-cdd43df7/ https://globalinfectiousdisease.com/research/articles/10-1186-s12879-026-12594-2-cdd43df7/ Wed, 21 Jan 2026 00:00:00 GMT Recognizing atypical disease trajectories and mixed-strain infections emphasizes the value of combining routine clinical evaluation with advanced molecular typing. Routine adoption of genomic sequencing could strengthen diagnostic precision and assist broader monitoring frameworks for perinatal pathogens. Listeriosis Genomic epidemiology Surveillance Diagnostics Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-1186-s12879-025-11913-3-efc4836a/ https://globalinfectiousdisease.com/research/articles/10-1186-s12879-025-11913-3-efc4836a/ Mon, 17 Nov 2025 00:00:00 GMT The findings provide genomic context for XDR-TB resistance-associated variation in the studied Argentine isolates. The authors state that the results support continued research and surveillance efforts, but the abstract does not quantify population-level effects or clinical outcomes. Tuberculosis Antimicrobial resistance Surveillance Genomic epidemiology Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-1186-s12879-025-11674-z-3f9c9d5c/ https://globalinfectiousdisease.com/research/articles/10-1186-s12879-025-11674-z-3f9c9d5c/ Wed, 22 Oct 2025 00:00:00 GMT This represents the first reported case of echovirus 18-associated aseptic meningitis in Niger. The authors emphasize the need for strengthened surveillance of viral meningitis etiologies in the country and further studies to understand prevalence, molecular epidemiology, and re-emergence risk of echovirus 18. Aseptic meningitis Surveillance Genomic epidemiology Treatment Travel medicine Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-jgar-2025-07-017-4637b665/ https://globalinfectiousdisease.com/research/articles/10-1016-j-jgar-2025-07-017-4637b665/ Tue, 22 Jul 2025 00:00:00 GMT The findings indicate that some resistance-associated mutations or deletions identified in this sample may not be detected by routine diagnostic methods described by the authors. The abstract also states that known resistance mutations could be assessed using Xpert MTB/XDR together with Xpert MTB/RIF, while rapid methods for detecting resistance to newer drugs remain needed. Tuberculosis Genomic epidemiology Antimicrobial resistance Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-3390-v17070955-aef136a7/ https://globalinfectiousdisease.com/research/articles/10-3390-v17070955-aef136a7/ Mon, 07 Jul 2025 00:00:00 GMT The manuscript concentrates on avian reservoir dynamics and evolutionary patterns, explicitly noting that direct human health implications remain unaddressed. Influenza H5N1 Genomic epidemiology Surveillance Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-jinf-2025-106469-c4631148/ https://globalinfectiousdisease.com/research/articles/10-1016-j-jinf-2025-106469-c4631148/ Tue, 01 Apr 2025 00:00:00 GMT Mapping these genetic and resistance patterns assists authorities in anticipating spread routes and prioritizing monitoring efforts in densely populated regions. Typhoid fever Paratyphoid fever Outbreak investigation Antimicrobial resistance Genomic epidemiology Transmission dynamics Surveillance Genomic study https://globalinfectiousdisease.com/research/articles/10-1038-s41591-025-03526-9-4f851f4f/ https://globalinfectiousdisease.com/research/articles/10-1038-s41591-025-03526-9-4f851f4f/ Tue, 25 Mar 2025 00:00:00 GMT The findings indicate that mpox transmission in NYC followed general principles of sexually transmitted pathogen spread within highly connected sexual networks, which may inform expectations about outbreak trajectories in similar populations. Monkeypox Transmission dynamics Outbreak investigation Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-jinf-2025-106421-400490db/ https://globalinfectiousdisease.com/research/articles/10-1016-j-jinf-2025-106421-400490db/ Sat, 01 Mar 2025 00:00:00 GMT The supplied abstract identifies multidrug-resistant Salmonella Enteritidis clades associated with reported gastroenteritis outbreaks and invasive disease in China. It describes implications for monitoring bacterial population changes and for further genomic epidemiological investigation, but does not establish causal effects or quantify risk beyond the studied isolates. Gastroenteritis Genomic epidemiology Antimicrobial resistance Outbreak investigation Surveillance Genomic study https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2024-29-49-2400264-ecf69bd0/ https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2024-29-49-2400264-ecf69bd0/ Thu, 05 Dec 2024 00:00:00 GMT The findings highlight gaps in identifying sources of human STEC infections despite existing monitoring programs. The decision to begin national-level STEC isolation aims to improve surveillance, source attribution, and guidance for monitoring and outbreak investigation. Gastroenteritis Genomic epidemiology Surveillance Climate and environment Travel medicine One Health Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-j-epidem-2024-100795-04b14d52/ https://globalinfectiousdisease.com/research/articles/10-1016-j-epidem-2024-100795-04b14d52/ Sun, 01 Dec 2024 00:00:00 GMT The work offers modelling guidance for infectious disease analysts: either model is suitable for endemic settings, whereas constant-size structured coalescent models should be avoided for epidemic outbreaks or changing population sizes, in favour of variable-size coalescent or birth–death approaches. COVID-19 One Health Outbreak investigation Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1080-22221751-2024-2412635-5235f344/ https://globalinfectiousdisease.com/research/articles/10-1080-22221751-2024-2412635-5235f344/ Fri, 11 Oct 2024 00:00:00 GMT Scenario analysis projects that small increases in the high sexual activity MSM population can trigger new waves. Findings support continued vaccination, targeted awareness in risk groups, and routine genomic surveillance to anticipate novel threats including global dissemination of clade I viruses. Monkeypox Outbreak investigation Vaccination One Health Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2024-29-36-2400161-2b6a690e/ https://globalinfectiousdisease.com/research/articles/10-2807-1560-7917-es-2024-29-36-2400161-2b6a690e/ Thu, 05 Sep 2024 00:00:00 GMT The work demonstrates integration of genomic, epidemiological and environmental data to investigate a large food-borne outbreak and to develop upstream tools that could help prevent future contamination events. Gastroenteritis Outbreak investigation Climate and environment Genomic epidemiology One Health Genomic study https://globalinfectiousdisease.com/research/articles/10-3201-eid3002-231274-bf5aeddd/ https://globalinfectiousdisease.com/research/articles/10-3201-eid3002-231274-bf5aeddd/ Thu, 01 Feb 2024 00:00:00 GMT The findings highlight the role of wild bird migration in sustaining and disseminating HPAI A(H5N1) clade 2.3.4.4b, underscoring the value of genomic surveillance for outbreak response and understanding viral spread. H5N1 Influenza Genomic epidemiology Surveillance Outbreak investigation Transmission dynamics Genomic study https://globalinfectiousdisease.com/research/articles/10-1038-s41467-023-44092-3-bd1cafab/ https://globalinfectiousdisease.com/research/articles/10-1038-s41467-023-44092-3-bd1cafab/ Tue, 12 Dec 2023 00:00:00 GMT The findings are positioned by the authors as contributing to understanding of the ongoing mpox outbreak in China and to informing joint prevention and control strategies. Monkeypox Outbreak investigation Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1038-s41591-023-02542-x-78e2381a/ https://globalinfectiousdisease.com/research/articles/10-1038-s41591-023-02542-x-78e2381a/ Mon, 11 Sep 2023 00:00:00 GMT The abstract presents genomic epidemiology as a potential tool for monitoring and controlling mpox outbreaks in real time. It also states that the findings may inform future vaccine policy for a population described as highly susceptible; this is an article-level implication rather than clinical or policy advice. Monkeypox Outbreak investigation Transmission dynamics Vaccination Genomic epidemiology Health policy Genomic study https://globalinfectiousdisease.com/research/articles/10-1080-22221751-2023-2239945-cb60ceb1/ https://globalinfectiousdisease.com/research/articles/10-1080-22221751-2023-2239945-cb60ceb1/ Wed, 02 Aug 2023 00:00:00 GMT Pertussis causes severe respiratory infection in infants and has resurged in industrialised countries despite vaccination, partly due to pathogen adaptation. Antimicrobial resistance has also emerged. The developed MGT system provides a scalable approach for global surveillance to understand public health risks posed by circulating and emerging strains. Pertussis Vaccination Genomic epidemiology Surveillance Transmission dynamics Antimicrobial resistance Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-s2666-5247-23-00108-8-1089958f/ https://globalinfectiousdisease.com/research/articles/10-1016-s2666-5247-23-00108-8-1089958f/ Tue, 01 Aug 2023 00:00:00 GMT Ongoing cross-national viral circulation persists despite broad antiviral accessibility, potentially obstructing localized reduction initiatives. Coordinated multinational intervention frameworks appear essential to manage persistent transmission routes. Hepatitis C Hepatitis E Transmission dynamics Genomic epidemiology Treatment Genomic study https://globalinfectiousdisease.com/research/articles/10-1038-s41467-023-38188-z-4a921168/ https://globalinfectiousdisease.com/research/articles/10-1038-s41467-023-38188-z-4a921168/ Thu, 11 May 2023 00:00:00 GMT The findings illuminate evolutionary rules governing convergent evolution in Omicron lineages and characterize immune evasion properties of emerging variants, relevant to understanding viral fitness and population immunity dynamics. SARS COVID-19 Outbreak investigation Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1016-s2666-5247-22-00192-6-c65e7eee/ https://globalinfectiousdisease.com/research/articles/10-1016-s2666-5247-22-00192-6-c65e7eee/ Tue, 01 Nov 2022 00:00:00 GMT The abstract identifies the virus's binding to human-type receptors and its occurrence in a human case as relevant to human health. The authors describe the observed human infection risk as low, with rare and sporadic cases, and call for monitoring of poultry and environmental virus activity and poultry-to-human transmission. COVID-19 Influenza Transmission dynamics Surveillance Outbreak investigation Genomic epidemiology One Health Genomic study https://globalinfectiousdisease.com/research/articles/10-1080-22221751-2022-2119167-c0ea35e6/ https://globalinfectiousdisease.com/research/articles/10-1080-22221751-2022-2119167-c0ea35e6/ Tue, 27 Sep 2022 00:00:00 GMT The findings identify CRF07_BC-infected individuals as key epidemic drivers and emphasize the need for targeted interventions on key clusters and individuals to block continued HIV-1 transmission across sexual risk groups. AIDS Treatment Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1038-s41591-022-01907-y-f9db9841/ https://globalinfectiousdisease.com/research/articles/10-1038-s41591-022-01907-y-f9db9841/ Fri, 24 Jun 2022 00:00:00 GMT The findings indicate that genomic sequencing may provide information for investigating the spread and transmission of monkeypox virus during an outbreak. The supplied evidence does not establish clinical effects, intervention effectiveness, or a current public health risk level. Monkeypox Outbreak investigation Transmission dynamics Genomic epidemiology Genomic study https://globalinfectiousdisease.com/research/articles/10-1038-s41467-022-29104-y-c66f01a9/ https://globalinfectiousdisease.com/research/articles/10-1038-s41467-022-29104-y-c66f01a9/ Thu, 17 Mar 2022 00:00:00 GMT The case provides article-level evidence that a remdesivir resistance-associated mutation can emerge during treatment of persistent SARS-CoV-2 infection in an immunocompromised patient. The abstract identifies resistance monitoring and combination treatment as relevant considerations in this clinical context, but does not establish population frequency or broader risk. SARS COVID-19 Tuberculosis Treatment Outbreak investigation Genomic epidemiology Genomic study