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Peer reviewedOpen accessSARSCOVID-19

Characterization and evolutionary history of novel SARS-CoV-2-related viruses in bats from Cambodia

Nature Communications·

Tey Putita Ou, Julia Guillebaud, Artem Baidaliuk, Sothyra Tum, Dany Chheang, Deborah Delaune, Matthieu Prot, Elise Bruder, Rafael Rahal Guaragna Machado, Leakhena Pum, Vibol Hul, Thavry Hoem, Sovann Ly, Heidi Auerswald, Frederick Arnaud, Kei Sato, Gavin JD Smith, Philippe Dussart, Erik A. Karlsson, Véronique Chevalier, Julien Cappelle, Veasna Duong, Etienne Simon-Loriere

DOI
10.1038/s41467-026-75954-1
PMID
42642437
PMCID
OpenAlex
W7170186476
Study type
Journal article
Publisher
Springer Science and Business Media LLC
Article type
journal-article
Integrity
current

Why this research matters now

The authors frame the findings as highlighting zoonotic risk and the need for ongoing surveillance at animal-to-human interfaces to support pandemic preparedness.

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Structured evidence summary

Research question

The study investigates the genetic diversity, evolutionary dynamics, and zoonotic potential of SARS-CoV-2-related coronaviruses circulating in bat populations in Cambodia.

Study design

This is a multi-year field sampling study combining metatranscriptomic and amplicon sequencing of bat specimens, with pseudovirus assays used to assess receptor-binding functionality.

Population and setting

The study sampled 1,462 bats over more than three years in Steung Treng province, Cambodia, with sarbecoviruses identified across multiple Rhinolophus species.

Main findings

Thirty-three complete sarbecovirus genomes were recovered and grouped into four distinct lineages associated with different Rhinolophus hosts. Two of these lineages carried receptor-binding domains with high similarity to SARS-CoV-2, and pseudovirus assays demonstrated spike-mediated entry into human ACE2-expressing cells. Evidence of rapid lineage migration and recombination over short geographic and temporal scales was also reported.

Public-health relevance

The authors frame the findings as highlighting zoonotic risk and the need for ongoing surveillance at animal-to-human interfaces to support pandemic preparedness.

Important limitations

The summary is limited to the supplied single-article abstract and metadata; the original paper is required to assess sample representativeness, methodological detail, and decision-grade interpretation. The abstract does not explicitly list study limitations.

GIDS interpretation

Within GIDS, this article is discoverable as a Cambodia-focused One Health surveillance study on bat sarbecoviruses relevant to SARS and COVID-19. The abstract does not link the findings to any active surveillance signal.

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Related GIDS surveillance

Literature context does not validate, explain, or change a surveillance signal. Exact and contextual relationships are shown separately.

03

Evidence relationships

This article has 9 auditable classifier relationships to diseases, places, topics, and study design.

about diseaseabout diseaseaddresses topicaddresses topichas pathogen typestudied instudied population settingstudies pathogenuses study design